CDS

Accession Number TCMCG016C27427
gbkey CDS
Protein Id OMO52842.1
Location join(5871..6038,6141..6818,8755..8913,9284..9352,9579..9701,9781..9930,10013..10144,10261..10340,10440..10558,10634..10701,11069..11170,11266..11324,11434..11541,11642..11717,12634..12770,12854..13013,13109..13288,13379..13495,14051..14206,14379..14546,14692..14801,14995..15118,15563..15658,15743..15805,15885..15944)
Organism Corchorus capsularis
locus_tag CCACVL1_29059

Protein

Length 1153aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015395.1
Definition hypothetical protein CCACVL1_29059 [Corchorus capsularis]
Locus_tag CCACVL1_29059

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent helicase hrq1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
KEGG_ko ko:K06877        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000217        [VIEW IN EMBL-EBI]
GO:0000405        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034644        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0035861        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070914        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901255        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCCGGAAAAACCATGGCGGAGATGGCAATTGAAGTCCGAACGCTGAGCGGTGAATCTACCGTGATTACAACATCGCCAGACAAAACAATTAACGATTTCAAGCTTCTTTTGAAACTCTCTTTTCCTCCCGCCTCCTCTTCTCCCAATTTCCATCTCTTCTACAAGGGCACTAAATTGAGCTCGCAAAGCAAACTAAGTAGTCTGTCGGTTCAGTGCGGTGATTTCTTGGTTTTGATTCCTTTTACTAAGAAAGACAAGCCTCGAGTTGAAAACCCTAGTTTTTCCAACAATGCAAGCACTGCCACAAGCTTTTCTGATTCCACTTACTCTGATATGATGCAAGAACTCTCTTATTTACGTGACGAATCAGTGAATTTAAGTGAAGGTAAAACTGATAATAACACCAATAATTTTTATTTTACAAGTAAACGGAAACGAGAAGGAACTGATAGAGATGAGAAAGATGAGGGGCATTCTTCTGATTTTTTATGGAATGTATTACGGTCTTCGGATGGGGATTTGTTTGATGAAAGGAATTGTAAGAAGTTTGTTGAGGTTTTGCAGTCAGTGAACTGTTTGTCGAGTCCATATTCAGGGGAATGTATGGTGTTAAGTGAGGCCAAATGTAGGAGTAGCAATGAACTTGCTTCCTGTTTGTGTCCTGTTTGGTTGAAGAAAGTAGTGGAGGGATTTGCTTTTGTGAGCATATTGTCCGGGTTTCTTCATCTGCGAACTGATAAGATGACCTCAGCTTGTTTGAAGGGAGTGCTGGACCGTTTAGAGAAATTTGGGGTTGGCATTTCTATGGAGGACATAGAGTGTCTTTCTGTTCTTTGTCCCAAGTCGAAACAGAGATATGAGAATCTGACGTCACTTTCATTAGAGGATGTGCTCATATTTGTGAAGGAAGGTGGTGTCGTTTTGGAAAGAAACAAAGTAAAGCAGGCAGGGAGAAGCTGGTGTTCTAGTTCAAAATCTCGTTCAGTCAAAAGACGATGTCATGACACAGGTCAATTGCAACCAGACGAAATGGTTGAGCATCTCAAGAAGAGCATCGGATCAGATGGGCAGCTGGTGCATGTCGAAAAAATTGCTGCTAGGAAAGCTTCCTATATGGAGATTCCTAAAGAGCTTTCGGACAACATCAAATCTGCCCTTAAGAGTATTGGAATTAATAAATTGTATAGCCACCAGGCAGAGTCAATAACAGCATCCCTTGCTGGGAAGAATGTTGTTGTGGCAACAATGACATCTAGTGGCAAATCTCTTTGCTATAATCTGCCAGTTTTGGAGCGATTGTCCTATAATTTGTCATCATGTGCACTTTACTTGTTTCCCACAAAGGCCTTGGCTCAAGACCAACTAAGAGCTTTACAATCTATGGTAAGTGAATTAGATTGTAGCATCAATATTGGGGTATATGATGGTGACACTCCTCAGAAAGAAAGGACATGGCTTCGAGACAATGCTAGATTGTTGATCACAAATCCCGATATGTTACACATGTCAATCCTGCCATTTCATAGAGAATTTAGTCGTATATTAACTAATCTTAGGTTCTTTGTTTTCTTGTTGTTAAGTTTTGTAGTGATTGATGAAGCTCATGCTTACAAGGGAGCTTTCGGATGTCACACTGCCCTTATACTAAGAAGACTCCGCAGGCTCTGCTCTCATGTGTATGGCAGTGATCCTTCTTTTGTTTTCTGTACGGCAACTTCTGCTAATCCTCGTGAGCACTGTATGGAACTTGCAAATCTGTCAACATTGGAGCTGATTGAAAATGATGGAAGTCCTTCTTCTGAAAAGCTTTTTGTTCTCTGGAATCCTGCTTTACGTCTCAGAACTGAAATGGATAAAAGGGTGTATGACTTAGATTCTAGAAATGCTTCAGATAAGAGTTTGAGTCCAATCTCAGAAGTTTCATACCTTTTTGCGGAAATGGTTCAGCATGGGCTCCGTTGCATTGCTTTTTGTAAATCACGTAAACTTTGTGAGCTTGTTTTATGTGATACGCGTGAAATCCTTGAAGAAACGGCTCCCCACCTTGTGAATTCCATATGTGCCTATCGTGCTGGCTATGTTGCTGAGGACCGGAGGAGAATAGAGAGAGAGTTATTTGGTGGGCAGCTCTGTGGTATTGCAGCAACAAATGCGCTTGAATTGGGAATTGATGTTGGGCATATTGATGTAACTCTGCATTTAGGCTTTCCTGGCAGTATTGCAAGCCTATGGCAGCAGGCTGGTAGGTCTGGCCGAAGAGAAAGGTCATCGCTGGCAGTTTATGTTGCATTTGAAGGGCCTCTTGATCAGTACTTTATGAAATTCCCTGAGAAACTATTCAGGAGTCCAATTGAGTGCTGTCATATTGATGCTCAAAATCAGCAGGTGCTTGAACAGCATCTGGTTTGTGCAGCTCTTGAACACCCGTTGAGTCTGCTTTATGATGAGAAATATTTCGGATCTGGTCTGAACAGTGCCATAACCACTCTTAAAAGCAGAGGATACTTAGTTTCTGATCCTTCAAGTGATTTTTTGGCTAAAATATGGAGTTACATTGGACATGAGAAAATGCCTTCACGTTCAATCAGTATACGGTCGATAGAGACAGAGAGATACATAGTAATAGATAAAGAAGAGAATGAAACCCTTGAAGAGATTGAGGAAAGCAGGGCTTTCTTTCAGGTATATGATGGTGCTGTTTACATGCACCAAGGGAGGACCTATCTGGTGAAGGATTTAGATTTATCAAGCAAAATTGCTTATTGCGAAAAAGCTGTTGTGGACTATTATACAAAGACACGTGATTATACGGACATACAAATTATTGGCGGTAAATTCGCCTATCCTGCCAGGGTCTCAAAGGACAATCTCCCAAGAACAACAGCTCAAGCAAATCCTTGTAGTGTAACGACTACATGGTTTGGCTTCCACCGAAAACGTAAAGGAAGCAACCAAATTATAGACACAGTTGATCTTTCTCTGCCTAGATTTTCATATGAATCCCAGGCAGTATGGATTAGTGTTCCACCATCCATAAAAGGAGAAGTAGAGAGGAAATACTCATTCCGTGCAGGTCTGCATGCTGCCTGTCATGCTGTTTTACATGTAGTGCCATTATGTACGAGGTGCAATTTATCTGATTTGGCTCCAGAGTGTCCAAATCCTCATGATACCCGCTTCTTCCCGGAGAGGATTCTATTATATGATCAGCATCCTGGAGGCAGTGGCATCTCAAAACAGATCCAACCGTATTTCACAGAGCTTTTGCATTCTGCTTTGGAACTTTTAACATGTTGCCACTGCTCTTTAGAAACTGGTTGCCCAAATTGCATTCAGAATTTGGCTTGTCACGAGTATAATGAGCTCATACATAAAGATGCAGCCATCATGATTATTAAGGGTGTTTTGGATGCGGAGAAATCATATTTCGAAGGAAACCCTGATTCCACACCTAGCTAG
Protein:  
MPGKTMAEMAIEVRTLSGESTVITTSPDKTINDFKLLLKLSFPPASSSPNFHLFYKGTKLSSQSKLSSLSVQCGDFLVLIPFTKKDKPRVENPSFSNNASTATSFSDSTYSDMMQELSYLRDESVNLSEGKTDNNTNNFYFTSKRKREGTDRDEKDEGHSSDFLWNVLRSSDGDLFDERNCKKFVEVLQSVNCLSSPYSGECMVLSEAKCRSSNELASCLCPVWLKKVVEGFAFVSILSGFLHLRTDKMTSACLKGVLDRLEKFGVGISMEDIECLSVLCPKSKQRYENLTSLSLEDVLIFVKEGGVVLERNKVKQAGRSWCSSSKSRSVKRRCHDTGQLQPDEMVEHLKKSIGSDGQLVHVEKIAARKASYMEIPKELSDNIKSALKSIGINKLYSHQAESITASLAGKNVVVATMTSSGKSLCYNLPVLERLSYNLSSCALYLFPTKALAQDQLRALQSMVSELDCSINIGVYDGDTPQKERTWLRDNARLLITNPDMLHMSILPFHREFSRILTNLRFFVFLLLSFVVIDEAHAYKGAFGCHTALILRRLRRLCSHVYGSDPSFVFCTATSANPREHCMELANLSTLELIENDGSPSSEKLFVLWNPALRLRTEMDKRVYDLDSRNASDKSLSPISEVSYLFAEMVQHGLRCIAFCKSRKLCELVLCDTREILEETAPHLVNSICAYRAGYVAEDRRRIERELFGGQLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRERSSLAVYVAFEGPLDQYFMKFPEKLFRSPIECCHIDAQNQQVLEQHLVCAALEHPLSLLYDEKYFGSGLNSAITTLKSRGYLVSDPSSDFLAKIWSYIGHEKMPSRSISIRSIETERYIVIDKEENETLEEIEESRAFFQVYDGAVYMHQGRTYLVKDLDLSSKIAYCEKAVVDYYTKTRDYTDIQIIGGKFAYPARVSKDNLPRTTAQANPCSVTTTWFGFHRKRKGSNQIIDTVDLSLPRFSYESQAVWISVPPSIKGEVERKYSFRAGLHAACHAVLHVVPLCTRCNLSDLAPECPNPHDTRFFPERILLYDQHPGGSGISKQIQPYFTELLHSALELLTCCHCSLETGCPNCIQNLACHEYNELIHKDAAIMIIKGVLDAEKSYFEGNPDSTPS